The detailed information of tRNA gene sequence


Sequence ID>WENV180050092
Genome IDMPLU02110248
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 12937
End posion on genome 13011
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tattaaatgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGCAGGTTCGAA
TCCTGTCCCCGCTACtt
Downstream region at tRNA end position 
gagtgacttg
Secondary structure (Cloverleaf model)
>WENV180050092	fMet	CAT
                   t      ACtt gagtgacttg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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