The detailed information of tRNA gene sequence


Sequence ID>WENV180050103
Genome IDMPLU02110928
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1278
End posion on genome 1206
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tagagcttta
tRNA gene sequence 
TCCCGGTTGGTGTAGTTGGTAACATTCGAGCCTGTCACGCTCGCGCCCGGGGTTCGATTC
CCCGATCGGGAGCtc
Downstream region at tRNA end position 
ctttttgttt
Secondary structure (Cloverleaf model)
>WENV180050103	Asp	GTC
                   a      GCtc ctttttgttt
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A          T T
                    T     G C C C C     A
      T G A        G      | | | | |     G
    T       T G T G       C G G G G     C
    G       | | | +                 T T
    G       A C A T
      T A          T     CGCC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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