The detailed information of tRNA gene sequence


Sequence ID>WENV180050227
Genome IDMPLU02120008
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1367
End posion on genome 1282
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttttttct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCTCGCCTGGAACGCGAGTTGGGTTCACGCCCTC
GCAGGTTCGAATCCTGTCCTCTCCGCta
Downstream region at tRNA end position 
gattacaaaa
Secondary structure (Cloverleaf model)
>WENV180050227	Ser	GGA
                   t      GCta gattacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTGGGTTCACGCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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