The detailed information of tRNA gene sequence


Sequence ID>WENV180050231
Genome IDMPLU02120151
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 645
End posion on genome 556
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatcggaaat
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position 
tgccggttgc
Secondary structure (Cloverleaf model)
>WENV180050231	Ser	CGA
                   t      GCCA tgccggttgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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