The detailed information of tRNA gene sequence


Sequence ID>WENV180050543
Genome IDMPLU02149806
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3398
End posion on genome 3325
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatagtttaa
tRNA gene sequence 
AGACGGATAGTGTAACGGTAGCACAATAAGCTCCAACCTTATTAGTCTGGGTTCAAATCC
TAGTTCGTCTGCCA
Downstream region at tRNA end position 
agaattcgtt
Secondary structure (Cloverleaf model)
>WENV180050543	Trp	CCA
                   a      GCCA agaattcgtt
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     G + T
                     A - T          T A
                    T     G A T C C     A
        A A        A      | | + | |     A
      C     T G T G       C T G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        A     TAGT
                    A - T
                    T - A
                    A - T
                    A - T
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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