The detailed information of tRNA gene sequence


Sequence ID>WENV180050633
Genome IDMPLU02156338
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4446
End posion on genome 4369
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ccccgaatgc
tRNA gene sequence 
AACGGGTTGGAGTAGTCAGGTTATCTCGTCGGGCTCATAACCCGGAGATCGGTGGTTCAA
ATCCACCACCCGTTACCA
Downstream region at tRNA end position 
ataaattaaa
Secondary structure (Cloverleaf model)
>WENV180050633	fMet	CAT
                   c      ACCA ataaattaaa
                     A - T
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C C A C C     A
    C T G A        G      | | | | |     A
  A         T G A G       G G T G G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGATC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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