The detailed information of tRNA gene sequence


Sequence ID>WENV180050674
Genome IDMPLU02160530
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4346
End posion on genome 4257
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatttacatc
tRNA gene sequence 
GGAGGGGTGGCAGAGCCTGGCTGATTGCACTGGTCTTGAAAACCAGCATGTCCTTTGGGG
CATCGGGGGTTCGAATCCCTCCCCCTCCGCat
Downstream region at tRNA end position 
taagaactta
Secondary structure (Cloverleaf model)
>WENV180050674	Ser	TGA
                   c      GCat taagaactta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     CATGTCCTTTGGGGCATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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