The detailed information of tRNA gene sequence


Sequence ID>WENV180050719
Genome IDMPLU02163747
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 355
End posion on genome 450
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgtcagcagt
tRNA gene sequence 
GGAGGTGTCTGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
ctcgtacccc
Secondary structure (Cloverleaf model)
>WENV180050719	SeC	TCA
                   t      GCCA ctcgtacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        T      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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