The detailed information of tRNA gene sequence


Sequence ID>WENV180050727
Genome IDMPLU02164394
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1218
End posion on genome 1294
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ggcgccactg
tRNA gene sequence 
GGGCCCGTAGCTTAGTCTGGTGGAGCTCCCGGCTCATAACCGGGCGGTCGTCGGTTCAAA
TCCGGCCGGGCCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180050727	Ile2	CAT
                   g      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | + | | |     A
    C       T T C G       G T C G G     C
    T       + | | |                 T T
    G       G A G C
      G T G        T     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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