The detailed information of tRNA gene sequence


Sequence ID>WENV180050735
Genome IDMPLU02164489
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 8797
End posion on genome 8886
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acaccgatgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGAGCCTTCACGGGTT
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gtttttccgg
Secondary structure (Cloverleaf model)
>WENV180050735	Ser	CGA
                   c      GCCA gtttttccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAGCCTTCACGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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