The detailed information of tRNA gene sequence


Sequence ID>WENV180051055
Genome IDMPLU02184177
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 240
End posion on genome 156
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcttcgttg
tRNA gene sequence 
GGAGGGATGGCCGAGTGGCTTATGGCGGCGCCCTGCTAAGGCGTTGGTGCTTGCACCGCG
TGGGTTCGAATCCCACTCCCTCCGCtg
Downstream region at tRNA end position 
ttaaggccgt
Secondary structure (Cloverleaf model)
>WENV180051055	Ser	GCT
                   g      GCtg ttaaggccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    C       T G G C
      T T A        G     TGGTGCTTGCACCGC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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