The detailed information of tRNA gene sequence


Sequence ID>WENV180051207
Genome IDMPLU02198031
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2522
End posion on genome 2427
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtttctagt
tRNA gene sequence 
GGAGGTGTCCGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGATAGGTGATCC
CTGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
aatttgaaaa
Secondary structure (Cloverleaf model)
>WENV180051207	SeC	TCA
                   t      GCCA aatttgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGATAGGTGATCCCTGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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