The detailed information of tRNA gene sequence


Sequence ID>WENV180051275
Genome IDMPLU02201213
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 191
End posion on genome 286
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taaattattt
tRNA gene sequence 
GGGAATGATTGCGAGGCTGGTGCCCGCTACGGTCTTCAAAACCGTTGTCCCGATTTTTAA
TCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttaaaagcc
Secondary structure (Cloverleaf model)
>WENV180051275	SeC	TCA
                   t      GCCA tttaaaagcc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       A G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        T     TGTCCCGATTTTTAATCGGGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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