The detailed information of tRNA gene sequence


Sequence ID>WENV180051352
Genome IDMPLU02207375
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 52097
End posion on genome 52171
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctttccgctg
tRNA gene sequence 
AGGGCAGTAGCTCAATTTGGTAGAGCACCGGTCTCCAAAACCGAAGGTTGTGGGTTCAAG
TCCCTCCTGCCCTGCtc
Downstream region at tRNA end position 
tgctgttgcc
Secondary structure (Cloverleaf model)
>WENV180051352	Trp	CCA
                   g      GCtc tgctgttgcc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      |   | | |     A
    T       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     AGGTT
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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