The detailed information of tRNA gene sequence


Sequence ID>WENV180051379
Genome IDMPLU02209005
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 179
End posion on genome 268
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatttttat
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCAGGCTTGGAAAGCTTGTGTACTGTCAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aattgtagta
Secondary structure (Cloverleaf model)
>WENV180051379	Ser	GGA
                   t      GCCA aattgtagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTGTCAAAGGTACC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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