The detailed information of tRNA gene sequence


Sequence ID>WENV180051391
Genome IDMPLU02210659
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 139
End posion on genome 47
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttggattt
tRNA gene sequence 
GGAGAGTTGGGTGAGTTGGTTTAAACCAGCAGTTTGCTAAATTGCCGTACGTCGTAAGAT
GTACCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
ttagtataaa
Secondary structure (Cloverleaf model)
>WENV180051391	Ser	GCT
                   t      GCCA ttagtataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G T G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGTCGTAAGATGTACC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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