The detailed information of tRNA gene sequence


Sequence ID>WENV180051420
Genome IDMPLU02212964
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 435
End posion on genome 346
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actattatat
tRNA gene sequence 
GGAAGAGTGGCAGAGAGGTTTAATGCGGCACACTGCTAATGTGTTTATCTCATCTATGGG
ATACGAAGGTTCGAATCCTTCCTCTTCCGCag
Downstream region at tRNA end position 
taaaaaaaag
Secondary structure (Cloverleaf model)
>WENV180051420	Ser	GCT
                   t      GCag taaaaaaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      A G A        G      | | | | |     G
    G       G A C G       G A A G G     C
    G         | | |                 T T
    T       A T G C
      T T A        G     TTATCTCATCTATGGGATAC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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