The detailed information of tRNA gene sequence


Sequence ID>WENV180051503
Genome IDMPLU02219820
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 116
End posion on genome 19
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agtccccggc
tRNA gene sequence 
GGAGGCGCTTCCTACGCTGGTGCGGGGCCCGGTCTTCAAAACCGGTGGGCGGCGGTAATC
CCGTCGTTGGTGGGTTCGATTCCCATGCGTCTCCGCCA
Downstream region at tRNA end position 
aacactctcc
Secondary structure (Cloverleaf model)
>WENV180051503	SeC	TCA
                   c      GCCA aacactctcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C G C        T      + | | | |     G
    T       A T C C       G T G G G     C
    G         + | |                 T T
    G       G G G G
      T G C        C     TGGGCGGCGGTAATCCCGTCGTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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