The detailed information of tRNA gene sequence


Sequence ID>WENV180051552
Genome IDMPLU02223033
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4000
End posion on genome 3911
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccgcttgct
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAGGCGCACGCCTGGAAAGCGTGATTACTTGAAAAGGTA
ACGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttattccgtg
Secondary structure (Cloverleaf model)
>WENV180051552	Ser	GGA
                   t      GCCA ttattccgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     ATTACTTGAAAAGGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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