The detailed information of tRNA gene sequence


Sequence ID>WENV180051746
Genome IDMPLU02241441
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 6055
End posion on genome 6150
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctcaacata
tRNA gene sequence 
GGAGAGTGGAAGGTGGCTGGTGCTCCTCGCGGTCTTCAAAACCGTTGTCGGTTCGTGAAT
GGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCA
Downstream region at tRNA end position 
agttcaattc
Secondary structure (Cloverleaf model)
>WENV180051746	SeC	TCA
                   a      GCCA agttcaattc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C A T C C     A
    C G G T        G      | | | | |     G
  T         G G A A       G T A G G     C
  G         + |   |                 T T
  G         T C C T
    T G C          C     TGTCGGTTCGTGAATGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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