The detailed information of tRNA gene sequence


Sequence ID>WENV180052088
Genome IDMPLU02268160
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 160
End posion on genome 71
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acctagctag
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCGCACGCTTGGAAAGTGTGTATACGGGAAATCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aatacataaa
Secondary structure (Cloverleaf model)
>WENV180052088	Ser	GGA
                   g      GCCA aatacataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACGGGAAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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