The detailed information of tRNA gene sequence


Sequence ID>WENV180052292
Genome IDMPLU02284927
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 813
End posion on genome 721
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcttaataat
tRNA gene sequence 
GGAGGTGAATGAGCGCCTGGTGGGCTCCCCGGTCTTCAAAACCGGTGAAAGGTTTAATAA
TCTTTGGCGGGTTCGATTCCCGTCCACCTCCGCta
Downstream region at tRNA end position 
attaatctag
Secondary structure (Cloverleaf model)
>WENV180052292	SeC	TCA
                   t      GCta attaatctag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A   C          T T
                    A     T G C C C     A
      C C G        T      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     TGAAAGGTTTAATAATCTTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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