The detailed information of tRNA gene sequence


Sequence ID>WENV180052305
Genome IDMPLU02286396
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 880
End posion on genome 803
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cggtggaagt
tRNA gene sequence 
AGCGGGTTGGAGTAGCCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGATCGTTCAA
ATCGATCACCCGCTACCA
Downstream region at tRNA end position 
tctcatccac
Secondary structure (Cloverleaf model)
>WENV180052305	fMet	CAT
                   t      ACCA tctcatccac
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T A G C     A
    C C G A        G      | | | | |     A
  A         T G A G       G A T C G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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