The detailed information of tRNA gene sequence


Sequence ID>WENV180052365
Genome IDMPLU02291824
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 12208
End posion on genome 12297
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgaatctt
tRNA gene sequence 
GGAAGGTTGCGAGAGTGGACGATTCGGTCACCTTGGAAAGGTGATGTGGCCTCCGGGTCA
CCATGGGTTCGAATCCCATACCTTCCTCCA
Downstream region at tRNA end position 
gcttctataa
Secondary structure (Cloverleaf model)
>WENV180052365	Ser	GGA
                   t      TCCA gcttctataa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       A T G G G     C
    G       + | | |                 T T
    A       T T C G
      C G A        G     TGTGGCCTCCGGGTCACC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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