The detailed information of tRNA gene sequence


Sequence ID>WENV180052366
Genome IDMPLU02291824
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 11606
End posion on genome 11517
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatgtgttaa
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position 
attccaaaag
Secondary structure (Cloverleaf model)
>WENV180052366	Ser	CGA
                   a      GCCA attccaaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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