The detailed information of tRNA gene sequence


Sequence ID>WENV180052378
Genome IDMPLU02292917
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 348
End posion on genome 437
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgtcttac
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
tttaccgctt
Secondary structure (Cloverleaf model)
>WENV180052378	Ser	GGA
                   c      GCCA tttaccgctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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