The detailed information of tRNA gene sequence


Sequence ID>WENV180052446
Genome IDMPLU02299395
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 469
End posion on genome 545
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgacaccac
tRNA gene sequence 
AGGGGTGTAGTTCGAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGGGGGTTCGAG
TCCCTCCACCCCTGCCA
Downstream region at tRNA end position 
aatttactta
Secondary structure (Cloverleaf model)
>WENV180052446	Trp	CCA
                   c      GCCA aatttactta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      A A G        A      | + | | |     G
    T       C T T G       G G G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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