The detailed information of tRNA gene sequence


Sequence ID>WENV180052448
Genome IDMPLU02299546
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 71
End posion on genome 147
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttcctcttgt
tRNA gene sequence 
AGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCCACCA
Downstream region at tRNA end position 
gtatttgcaa
Secondary structure (Cloverleaf model)
>WENV180052448	fMet	CAT
                   t      ACCA gtatttgcaa
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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