The detailed information of tRNA gene sequence


Sequence ID>WENV180052530
Genome IDMPLU02305922
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 171
End posion on genome 95
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atttaaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGGCGGTTCAAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
attcatttta
Secondary structure (Cloverleaf model)
>WENV180052530	fMet	CAT
                   t      ACCA attcatttta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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