The detailed information of tRNA gene sequence


Sequence ID>WENV180052536
Genome IDMPLU02306017
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 624
End posion on genome 548
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgatattcag
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTCAAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
tttcatctaa
Secondary structure (Cloverleaf model)
>WENV180052536	fMet	CAT
                   g      ACCA tttcatctaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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