The detailed information of tRNA gene sequence


Sequence ID>WENV180052545
Genome IDMPLU02306827
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 668
End posion on genome 583
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacatttttT
tRNA gene sequence 
GCCGAGGTCGCTTAGCCTGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCGGCGTtt
Downstream region at tRNA end position 
tatttttcta
Secondary structure (Cloverleaf model)
>WENV180052545	Ser	TGA
                   T      GTtt tatttttcta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T T C G       G G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTGCGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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