The detailed information of tRNA gene sequence


Sequence ID>WENV180052781
Genome IDMPLU02324574
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 73
End posion on genome 170
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcgacggaga
tRNA gene sequence 
GGGAGTGGATCGGTGCTGGTGTGCCGCCCGGCCTTCAAAGCCGGTTGGGCCTCGTGAACA
GCGGGGCCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
cctccgcccc
Secondary structure (Cloverleaf model)
>WENV180052781	SeC	TCA
                   a      GCCA cctccgcccc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      G T          C     TTGGGCCTCGTGAACAGCGGGGCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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