The detailed information of tRNA gene sequence


Sequence ID>WENV180053322
Genome IDMPLV02009854
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2068
End posion on genome 2161
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tataaaatat
tRNA gene sequence 
GGGAATGATTAGGTGGCTGGTGCCCCTCGCGGTCTTCAACACCGTTGTCTTATATATTGT
ATAAGAGCTGGGTTCAATTCCCAGGCGTTCCCGCaa
Downstream region at tRNA end position 
aaaaatgtaa
Secondary structure (Cloverleaf model)
>WENV180053322	SeC	TCA
                   t      GCaa aaaaatgtaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     A
    T       T G G A       C T G G G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGTCTTATATATTGTATAAGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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