The detailed information of tRNA gene sequence


Sequence ID>WENV180053380
Genome IDMPLV02013339
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3799
End posion on genome 3725
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tagatctaat
tRNA gene sequence 
AGGAGTGTAGCTCAACTAGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGAT
TCCTGCCACTCCTGCag
Downstream region at tRNA end position 
aatttatatt
Secondary structure (Cloverleaf model)
>WENV180053380	Trp	CCA
                   t      GCag aatttatatt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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