The detailed information of tRNA gene sequence


Sequence ID>WENV180054521
Genome IDMPLV02094416
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 49
End posion on genome 139
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatatttttc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCACGCTTGGAAAGCGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ctatagaata
Secondary structure (Cloverleaf model)
>WENV180054521	Ser	GGA
                   c      GCCA ctatagaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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