The detailed information of tRNA gene sequence


Sequence ID>WENV180055236
Genome IDMPLV02145663
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3831
End posion on genome 3926
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taaattattt
tRNA gene sequence 
GGGAATGATTGCGAGGCTGGTGCCCGCTACGGTCTTCAAAACCGTTGTCCCGATTTTTAA
TCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttaaaagcc
Secondary structure (Cloverleaf model)
>WENV180055236	SeC	TCA
                   t      GCCA tttaaaagcc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       A G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        T     TGTCCCGATTTTTAATCGGGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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