The detailed information of tRNA gene sequence


Sequence ID>WENV180055276
Genome IDMPLV02148029
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 325
End posion on genome 416
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatgtcatat
tRNA gene sequence 
GGAAGAGTGGGTGAGAGGCTGAAACCAGTCGTTTGCTAAATGACCGTGCGAGGAAACTTG
TACCGAGGGTTCGAATCCCTCCTCTTCCGCCA
Downstream region at tRNA end position 
ttaaaataga
Secondary structure (Cloverleaf model)
>WENV180055276	Ser	GCT
                   t      GCCA ttaaaataga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCGAGGAAACTTGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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