The detailed information of tRNA gene sequence


Sequence ID>WENV180055500
Genome IDMPLV02164451
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3563
End posion on genome 3658
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taaataattT
tRNA gene sequence 
GGACCGGTCGTCTAGTTTGGTTTGGATGACGCACTCACACTGCGTAAGGAAGAAATTCCC
GCAAAGGTCGTGGGTTCAAATCCCATCCGGTCCATta
Downstream region at tRNA end position 
actttgttaa
Secondary structure (Cloverleaf model)
>WENV180055500	Val	CAC
                   T      ATta actttgttaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T T G A        C      + | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AAGGAAGAAATTCCCGCAAAGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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