The detailed information of tRNA gene sequence


Sequence ID>WENV180055883
Genome IDMPLV02188776
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 567
End posion on genome 472
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taatattatt
tRNA gene sequence 
GGGAATGATTGCGCGGCTGGTGCCCGCTGCGGTCTTCAAAACCGTTGTCCCGGTGCTAAA
TCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttagaaatc
Secondary structure (Cloverleaf model)
>WENV180055883	SeC	TCA
                   t      GCCA tttagaaatc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       C G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        T     TGTCCCGGTGCTAAATCGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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