The detailed information of tRNA gene sequence


Sequence ID>WENV180055909
Genome IDMPLV02190628
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 23
End posion on genome 99
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttcttctagt
tRNA gene sequence 
AGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCCACCA
Downstream region at tRNA end position 
tattatcagt
Secondary structure (Cloverleaf model)
>WENV180055909	fMet	CAT
                   t      ACCA tattatcagt
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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