The detailed information of tRNA gene sequence


Sequence ID>WENV180055941
Genome IDMPLV02193038
Search identical group
Phylum/Class[MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2578
End posion on genome 2492
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gactttttgt
tRNA gene sequence 
GCGGGGATCGCCTAGCCTGGTAGGGCGTAGGATTGCTAATCCTATGTCCGCAAGGACACG
GGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>WENV180055941	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTCCGCAAGGACAC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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