The detailed information of tRNA gene sequence


Sequence ID>WENV180055999
Genome IDMPLW02002668
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1039
End posion on genome 1130
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcaaatcca
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTAGGCTAATCCCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aattattaac
Secondary structure (Cloverleaf model)
>WENV180055999	Ser	GCT
                   a      GCCA aattattaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTAGGCTAATCCCCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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