The detailed information of tRNA gene sequence


Sequence ID>WENV180056121
Genome IDMPLW02011110
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5149
End posion on genome 5244
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgtcgaccct
tRNA gene sequence 
GGAGGTGTCTGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
atccggcccc
Secondary structure (Cloverleaf model)
>WENV180056121	SeC	TCA
                   t      GCCA atccggcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        T      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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