The detailed information of tRNA gene sequence


Sequence ID>WENV180056605
Genome IDMPLW02044994
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 220
End posion on genome 128
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccctgatttc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTGTAGCC
TCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatctttttt
Secondary structure (Cloverleaf model)
>WENV180056605	Ser	GCT
                   c      GCCA gatctttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTGTAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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