The detailed information of tRNA gene sequence


Sequence ID>WENV180056619
Genome IDMPLW02046130
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2775
End posion on genome 2686
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gttaaaaaat
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCAGGCTTGGAAAGCTTGTATACTGTTAAAGGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttatttatc
Secondary structure (Cloverleaf model)
>WENV180056619	Ser	GGA
                   t      GCCA tttatttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACTGTTAAAGGTATC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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