The detailed information of tRNA gene sequence


Sequence ID>WENV180056686
Genome IDMPLW02051724
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 325
End posion on genome 414
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaatagaac
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTAGGTTTATCGCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
ttaaagtcag
Secondary structure (Cloverleaf model)
>WENV180056686	Ser	GCT
                   c      GCtc ttaaagtcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTAGGTTTATCGCCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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