The detailed information of tRNA gene sequence


Sequence ID>WENV180056832
Genome IDMPLW02061476
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2703
End posion on genome 2613
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaagataa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCGGTTTCGAAAGCCGTTGACGGGTAATCCTCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gagataataa
Secondary structure (Cloverleaf model)
>WENV180056832	Ser	CGA
                   a      GCCA gagataataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACGGGTAATCCTCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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