The detailed information of tRNA gene sequence


Sequence ID>WENV180056865
Genome IDMPLW02063357
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 881
End posion on genome 974
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtcagcgcc
tRNA gene sequence 
GGAGGTGTCTGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCta
Downstream region at tRNA end position 
ccgactttag
Secondary structure (Cloverleaf model)
>WENV180056865	SeC	TCA
                   c      GCta ccgactttag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        T      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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