The detailed information of tRNA gene sequence


Sequence ID>WENV180056884
Genome IDMPLW02065521
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 8380
End posion on genome 8456
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcatcttcgc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAAGTTCAAA
TCTTGCCCCCGCCACCA
Downstream region at tRNA end position 
agaagccgca
Secondary structure (Cloverleaf model)
>WENV180056884	fMet	CAT
                   c      ACCA agaagccgca
                     T   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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