The detailed information of tRNA gene sequence


Sequence ID>WENV180056907
Genome IDMPLW02067263
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 399
End posion on genome 475
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttttggtcga
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGGAGTTCAAA
TCTCCCCCCCGCCACCA
Downstream region at tRNA end position 
aataagaccc
Secondary structure (Cloverleaf model)
>WENV180056907	fMet	CAT
                   a      ACCA aataagaccc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       C G A G       G G G A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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